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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6340284_6341386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6340284 - 6341386

Intron Length:

1103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAATTC

5'SS Class:

major

3'SS Sequence:

TTTATTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

TEVTEELESEADQDDKYTND

Intron Amino Acid Position:

1081

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

69.3

36.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.3

0.88

0.7

27.8

Minor 5ss

40.5

-1.1

3.5

58.5

46.3

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046484

6295541 - 6368877

73337

ENSAPLT00000017057

6296886 - 6368877

71992

ENSAPLT00000017056

6295698 - 6366692

70995