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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6366693_6368260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

6366693 - 6368260

Intron Length:

1568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAATACA

5'SS Class:

major

3'SS Sequence:

GACTCCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TGATTGTTGACT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

66.9

38.2

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

67.3

0.39

0.9

63.2

37.9

Minor 5ss

37.4

-1.4

2.8

44.1

43.3

Minor BPS

56.1

0.27

2.1

76.1

40.6

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046484

6295541 - 6368877

73337

ENSAPLT00000017057

6296886 - 6368877

71992