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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6449774_6449923_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6449774 - 6449923

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGGCCG

5'SS Class:

major

3'SS Sequence:

TTTTGCTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

AGCCGCTACACC

Flanking Amino Acid:

QSMRRNYTLEGNELHWLACA

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

44.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

80.1

0.68

77.1

37.1

Minor 5ss

24.2

-3

3.2

29.7

43.3

Minor BPS

39.5

-0.8

2.3

46.43

42.6

Associated Gene:

Gene:

RBL2

Ensembl Gene ID:

ENSAPLG00000001177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001450

6429776 - 6450268

20493