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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6456976_6457804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6456976 - 6457804

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

ATGTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATCAA

U12 Branch Point Sequence:

GCTATCAAAACA

Flanking Amino Acid:

PEWGDVVKQSGFLPEVMFDR

Intron Amino Acid Position:

2576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

66.7

0.42

1.1

69.7

35.6

Major PPT

83.3

0.75

0.8

77.8

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

46.1

-0.3

1.9

57.25

Associated Gene:

Gene:

CHD9

Ensembl Gene ID:

ENSAPLG00000002826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038388

6456112 - 6471225

15114

ENSAPLT00000002906

6456112 - 6530331

74220