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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6460287_6461059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6460287 - 6461059

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTCTTTATAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTCTTTATAATA

Flanking Amino Acid:

YVEDLGACIPRTQLHDGRPK

Intron Amino Acid Position:

2494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

76.8

0.6

0.9

74.4

33.8

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

60.6

0.33

1.5

71.1

35.7

Associated Gene:

Gene:

CHD9

Ensembl Gene ID:

ENSAPLG00000002826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038388

6456112 - 6471225

15114

ENSAPLT00000002906

6456112 - 6530331

74220