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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6461907_6462746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6461907 - 6462746

Intron Length:

840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATATACT

5'SS Class:

major

3'SS Sequence:

GTAATTTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAA

U12 Branch Point Sequence:

TCGACATGAATT

Flanking Amino Acid:

VNFPKSLPESGTSSHITASA

Intron Amino Acid Position:

2373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

70.4

39.7

Major BPS

65.6

0.39

0.9

55.7

32.1

Major PPT

64.9

0.34

63.9

42.4

Minor 5ss

43.4

-0.7

2.6

52.1

44.7

Minor BPS

49.6

0.05

1.8

66.83

43.8

Associated Gene:

Gene:

CHD9

Ensembl Gene ID:

ENSAPLG00000002826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038388

6456112 - 6471225

15114

ENSAPLT00000002906

6456112 - 6530331

74220