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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6463996_6464851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6463996 - 6464851

Intron Length:

856

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCGGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

TTACACTTACAA

Flanking Amino Acid:

YMLAASYWPKDRVMINRLDS

Intron Amino Acid Position:

2226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.6

1.12

0.8

80.1

34.5

Major BPS

60.3

0.26

65.5

Major PPT

71.7

0.49

0.9

68.4

37.4

Minor 5ss

30.2

-2.3

3.8

41.6

Minor BPS

49.1

-0

1.9

64.53

40.9

Associated Gene:

Gene:

CHD9

Ensembl Gene ID:

ENSAPLG00000002826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002906

6456112 - 6530331

74220

ENSAPLT00000038388

6456112 - 6471225

15114