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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6469251_6469888_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6469251 - 6469888

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGAGTG

5'SS Class:

major

3'SS Sequence:

GAAACTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

GAAACTTTAACA

Flanking Amino Acid:

AEQRANDYIDGDVEDPEYKP

Intron Amino Acid Position:

1727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

60.8

44.4

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

61.4

0.26

1.1

54.7

44.1

Minor 5ss

32.2

-2

3.7

38.1

46.9

Minor BPS

66.6

0.52

1.3

67.43

38.2

Associated Gene:

Gene:

CHD9

Ensembl Gene ID:

ENSAPLG00000002826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038388

6456112 - 6471225

15114

ENSAPLT00000002906

6456112 - 6530331

74220