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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6472331_6472807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6472331 - 6472807

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGACC

5'SS Class:

strong_major

3'SS Sequence:

TTAAATTATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTATTTTAAAT

Flanking Amino Acid:

GQTRELQNHLGLSAPVPRGR

Intron Amino Acid Position:

1570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

72.2

37.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.41

62.4

42.9

Minor 5ss

33.7

-1.9

3.1

41.4

39.1

Minor BPS

66.3

0.59

1.4

80.02

35.4

Associated Gene:

Gene:

CHD9

Ensembl Gene ID:

ENSAPLG00000002826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002906

6456112 - 6530331

74220