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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6481832_6482484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6481832 - 6482484

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGGAA

5'SS Class:

major

3'SS Sequence:

TTGATTCATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

TTTTCCCCGACA

Flanking Amino Acid:

EFGDLKTEEQVQKLQAILKP

Intron Amino Acid Position:

1064

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

63.8

35.9

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

76.6

0.6

74.4

40.3

Minor 5ss

34.7

-1.7

3.5

46.2

Minor BPS

61.7

0.36

1.9

80.14

35.3

Associated Gene:

Gene:

CHD9

Ensembl Gene ID:

ENSAPLG00000002826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002906

6456112 - 6530331

74220