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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6482629_6483427_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6482629 - 6483427

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTCCTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTGCACTTAAGT

Flanking Amino Acid:

LLEGLKLMNLEHKVLLTGTP

Intron Amino Acid Position:

1016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

72.2

32.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

87.9

0.85

0.6

24.2

Minor 5ss

33.2

-1.9

2.8

42.6

38.5

Minor BPS

60.4

0.41

1.9

78.54

43.3

Associated Gene:

Gene:

CHD9

Ensembl Gene ID:

ENSAPLG00000002826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002906

6456112 - 6530331

74220