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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6490857_6491425_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6490857 - 6491425

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTAATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTAATGTTAATC

Flanking Amino Acid:

TEEFFVKYKNYSYLHCEWAT

Intron Amino Acid Position:

720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

77.9

0.63

0.9

75.5

38.4

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

53.3

0.08

2.1

67.33

38.5

Associated Gene:

Gene:

CHD9

Ensembl Gene ID:

ENSAPLG00000002826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002906

6456112 - 6530331

74220