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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6552894_6563507_F

Intron Information:

Intron Rank:

145096

Intron Class:

major

Intron Phase:

Intron Coordinates:

6552894 - 6563507

Intron Length:

10614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.9

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.8

0.6

0.8

72.2

31.8

Minor 5ss

35.4

-1.7

44.5

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022026

6552542 - 6564355

11814