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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6552894_6564318_F

Intron Information:

Intron Rank:

145099

Intron Class:

major

Intron Phase:

Intron Coordinates:

6552894 - 6564318

Intron Length:

11425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCAATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ATTCCTTCAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.9

38.6

Major BPS

78.6

0.71

79.6

32.9

Major PPT

75.4

0.57

0.9

70.3

33.9

Minor 5ss

35.4

-1.7

44.5

Minor BPS

58.2

0.12

1.6

63.56

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031007

6552830 - 6564355

11526