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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6573476_6577741_F

Intron Information:

Intron Rank:

137531

Intron Class:

major

Intron Phase:

Intron Coordinates:

6573476 - 6577741

Intron Length:

4266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATTTAAG

5'SS Class:

major

3'SS Sequence:

GTCTCTGCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAGTAC

U12 Branch Point Sequence:

TTTCCCCTAGTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

65.2

40.1

Major BPS

45.1

-0.3

1.4

41.1

39.4

Major PPT

76.4

0.59

0.9

73.1

37.3

Minor 5ss

41.4

-1

2.5

47.5

43.4

Minor BPS

56.1

0.19

1.9

73.96

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038442

6573305 - 6589951

16647