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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6577863_6589720_F

Intron Information:

Intron Rank:

137532

Intron Class:

major

Intron Phase:

Intron Coordinates:

6577863 - 6589720

Intron Length:

11858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

CTCTGTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTAGAT

U12 Branch Point Sequence:

CTCTGTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

72.9

39.3

Major BPS

55.2

0.13

1.2

52.5

43.3

Major PPT

80.2

0.68

0.8

74.8

33.6

Minor 5ss

44.1

-0.6

2.9

63.9

41.5

Minor BPS

48.2

-0.1

2.2

61.93

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039603

6574986 - 6589951

14966

ENSAPLT00000038442

6573305 - 6589951

16647