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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6714380_6723350_F

Intron Information:

Intron Rank:

136642

Intron Class:

major

Intron Phase:

Intron Coordinates:

6714380 - 6723350

Intron Length:

8971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TAGAATTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

85.2

0.79

0.8

37.2

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

58.2

0.33

1.5

70.78

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029984

6714169 - 6727761

13593