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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6735352_6735728_F

Intron Information:

Intron Rank:

136647

Intron Class:

major

Intron Phase:

Intron Coordinates:

6735352 - 6735728

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGGGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTATTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGCCTTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

72.3

34.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.3

0.73

87.2

30.4

Minor 5ss

30.6

-2.2

36.7

40.9

Minor BPS

56.6

0.2

1.4

62.22

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038610

6729395 - 6736617

7223