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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6791021_6794968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6791021 - 6794968

Intron Length:

3948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGATGTT

5'SS Class:

major

3'SS Sequence:

TGTCCTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TGTGCCCTAACG

Flanking Amino Acid:

ANNAFLAANEQTFHTPSLGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

78.6

35.9

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

82.5

0.73

0.7

Minor 5ss

36.6

-1.5

3.7

57.3

47.4

Minor BPS

0.21

1.9

69.09

43.9

Associated Gene:

Gene:

TOX3

Ensembl Gene ID:

ENSAPLG00000003299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042899

6781375 - 6815479

34105

ENSAPLT00000003364

6770240 - 6833264

63025

ENSAPLT00000003362

6742504 - 6833264

90761