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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6795224_6809402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6795224 - 6809402

Intron Length:

14179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGCA

5'SS Class:

major

3'SS Sequence:

CAATCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCTCTGTTAATG

Flanking Amino Acid:

GIIHNNGLHMDQSHTQVSQY

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

67.7

37.6

Major BPS

84.4

0.85

34.5

Major PPT

77.2

0.61

0.9

73.6

36.4

Minor 5ss

31.7

-2.1

3.3

37.8

42.2

Minor BPS

50.2

-0.1

2.1

59.73

42.8

Associated Gene:

Gene:

TOX3

Ensembl Gene ID:

ENSAPLG00000003299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003362

6742504 - 6833264

90761

ENSAPLT00000042899

6781375 - 6815479

34105

ENSAPLT00000003364

6770240 - 6833264

63025