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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6812525_6814738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6812525 - 6814738

Intron Length:

2214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCTA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCAAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AGTTTTTGAATT

Flanking Amino Acid:

AAYRASLVSKAAAESAEAQT

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

65.4

0.35

0.9

58.7

Minor 5ss

41.4

-1

3.1

56.1

Minor BPS

62.7

0.48

1.3

75.46

35.2

Associated Gene:

Gene:

TOX3

Ensembl Gene ID:

ENSAPLG00000003299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003362

6742504 - 6833264

90761

ENSAPLT00000042899

6781375 - 6815479

34105

ENSAPLT00000003364

6770240 - 6833264

63025