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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6815465_6833174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6815465 - 6833174

Intron Length:

17710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACCAC

U12 Branch Point Sequence:

TTTTTTTTCTCT

Flanking Amino Acid:

SQTQTQVLSQNNSPHHCLYC

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

1.2

90.9

28.7

Major BPS

49.1

-0

1.3

58.8

37.5

Major PPT

90.9

0.92

0.6

84.1

30.9

Minor 5ss

37.1

-1.5

2.8

51.6

44.9

Minor BPS

45.5

-0.2

3.6

82.72

39.3

Associated Gene:

Gene:

TOX3

Ensembl Gene ID:

ENSAPLG00000003299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003364

6770240 - 6833264

63025

ENSAPLT00000003362

6742504 - 6833264

90761