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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6926879_6927109_R

Intron Information:

Intron Rank:

150028

Intron Class:

major

Intron Phase:

Intron Coordinates:

6926879 - 6927109

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

CTGTACTGATAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

81.2

0.7

0.8

73.2

37.2

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

-0.4

1.9

53.54

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027249

6926361 - 6927728

1368