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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6940057_6941760_F

Intron Information:

Intron Rank:

137327

Intron Class:

major

Intron Phase:

Intron Coordinates:

6940057 - 6941760

Intron Length:

1704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGTG

5'SS Class:

major

3'SS Sequence:

CCATCTGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GCATTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

40.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.8

0.54

0.9

64.6

41.1

Minor 5ss

38.7

-1.3

49.5

46.8

Minor BPS

61.6

0.44

1.4

70.2

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027376

6896155 - 6981557

85403

ENSAPLT00000027161

6896155 - 7011580

115426

ENSAPLT00000024517

6939740 - 6942882

3143

ENSAPLT00000044452

6893065 - 6959999

66935

ENSAPLT00000031101

6893065 - 6959999

66935