Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_72337_73112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72337 - 73112

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTCTTTTAATG

Flanking Amino Acid:

YTPLHIAAICGQTSLVDLLV

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.7

0.53

1.1

71.8

42.8

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

64.1

0.31

1.3

63.63

39.2

Associated Gene:

Gene:

ANKRD27

Ensembl Gene ID:

ENSAPLG00000011807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040364

49996 - 88364

38369

ENSAPLT00000033866

49668 - 88364

38697

ENSAPLT00000012393

53478 - 88364

34887