Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_740938_741949_F

Intron Information:

Intron Rank:

133116

Intron Class:

major

Intron Phase:

Intron Coordinates:

740938 - 741949

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAAG

5'SS Class:

major

3'SS Sequence:

GTTCTCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TATTCCTAATAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.3

39.4

Major BPS

81.9

0.79

0.9

80.1

Major PPT

76.4

0.59

37.3

Minor 5ss

32.5

-2

2.8

43.3

43.8

Minor BPS

55.8

0.26

78.59

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022694

740377 - 742649

2273