Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_7453305_7453396_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7453305 - 7453396

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGCGCGGA

5'SS Class:

major

3'SS Sequence:

TATTCTGCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTAGTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.1

50.8

42.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.3

0.55

0.9

40.5

Minor 5ss

29.7

-2.3

3.4

37.3

47.4

Minor BPS

57.1

0.3

2.2

84.39

36.6

Associated Gene:

Gene:

SALL1

Ensembl Gene ID:

ENSAPLG00000003356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003414

7453289 - 7467141

13853