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Intron Name: Anas_platyrhynchos_platyrhynchos_12_75293_79115_F


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
75293 - 79115

Intron Length:
3823

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGTCTG

5'SS Class:
strong_major

3'SS Sequence:
TCTTCATACATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAT

U12 Branch Point Sequence:
GTTTTCTTCATA

Flanking Amino Acid:
QEEIKNSYKEVEKLLRAVAD

Intron Amino Acid Position:
670

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.8
1.06
0.8
81.8
38.5

Major BPS
87.4
0.93
0.9
87.9
29.5

Major PPT
70.4
0.46
0.9
65.9
33.9

Minor 5ss
37.8
-1.4
3
49.5
46.7

Minor BPS
64.7
0.46
1.7
75.34
36.5

Associated Gene:

Gene:
ANKRD27

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

53478 - 88364
34887

49996 - 88364
38369

49668 - 88364
38697