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Intron Name: Anas_platyrhynchos_platyrhynchos_12_7573826_7579202_F

Intron Information:

Intron Rank:

146164

Intron Class:

major

Intron Phase:

Intron Coordinates:

7573826 - 7579202

Intron Length:

5377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TCCCATTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AATTTTCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

76.8

0.6

0.8

70.9

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

59.7

0.38

1.6

75.69

34.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043942

7573753 - 7579617

5865