Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_7707637_7708347_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7707637 - 7708347

Intron Length:

711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACATCAT

5'SS Class:

major

3'SS Sequence:

TTTTTTGGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

TTTTTTTGGAGC

Flanking Amino Acid:

LFFDSMADRDGRRIVLRAEN

Intron Amino Acid Position:

894

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

64.1

41.7

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

75.9

0.58

40.3

Minor 5ss

34.3

-1.8

3.3

46.4

44.2

Minor BPS

52.1

0.05

1.8

69.32

36.7

Associated Gene:

Gene:

CYLD

Ensembl Gene ID:

ENSAPLG00000012780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013337

7707518 - 7724295

16778