Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_7738076_7739672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7738076 - 7739672

Intron Length:

1597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGATGCT

5'SS Class:

major

3'SS Sequence:

ATATTGGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATAATCTGAAAT

Flanking Amino Acid:

KENPKKDDLQDSNASLSPNS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.2

64.2

40.1

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

69.7

0.44

66.5

44.4

Minor 5ss

29.6

-2.3

3.4

44.7

Minor BPS

0.2

1.6

70.54

39.4

Associated Gene:

Gene:

SNX20

Ensembl Gene ID:

ENSAPLG00000013062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013595

7736968 - 7743411

6444