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Intron Name: Anas_platyrhynchos_platyrhynchos_12_7805132_7809510_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7805132 - 7809510

Intron Length:

4379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTCTGCTGAATT

Flanking Amino Acid:

SSEKKQRASLRYHQSENNPE

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

72.4

0.5

68.1

37.6

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

61.4

0.44

1.9

80.5

41.8

Associated Gene:

Gene:

NKD1

Ensembl Gene ID:

ENSAPLG00000013087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029031

7803672 - 7885902

82231

ENSAPLT00000013630

7803672 - 7908446

104775

ENSAPLT00000040912

7802672 - 7908745

106074

ENSAPLT00000037815

7802672 - 7850561

47890

ENSAPLT00000037229

7802911 - 7908745

105835