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Intron Name: Anas_platyrhynchos_platyrhynchos_12_7809596_7810632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7809596 - 7810632

Intron Length:

1037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

GAATATGTACTT

Flanking Amino Acid:

KKKSILLNHTDLQSARHRAE

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

75.2

40.6

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

78.7

0.65

76.2

37.8

Minor 5ss

-1.6

3.3

45.6

43.8

Minor BPS

40.6

-0.6

2.2

55.35

40.9

Associated Gene:

Gene:

NKD1

Ensembl Gene ID:

ENSAPLG00000013087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037815

7802672 - 7850561

47890

ENSAPLT00000037229

7802911 - 7908745

105835

ENSAPLT00000029031

7803672 - 7885902

82231

ENSAPLT00000013630

7803672 - 7908446

104775

ENSAPLT00000040912

7802672 - 7908745

106074