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Intron Name: Anas_platyrhynchos_platyrhynchos_12_7810781_7821467_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7810781 - 7821467

Intron Length:

10687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

AATCCAACTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TGTGTTTCAATC

Flanking Amino Acid:

TGSKKQLKFEDITSLLHTIY

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.2

36.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

62.4

0.28

0.9

57.4

37.8

Minor 5ss

38.6

-1.3

52.1

38.3

Minor BPS

51.8

0.04

1.6

62.32

37.9

Associated Gene:

Gene:

NKD1

Ensembl Gene ID:

ENSAPLG00000013087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037229

7802911 - 7908745

105835