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Intron Name: Anas_platyrhynchos_platyrhynchos_12_7840882_7908052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7840882 - 7908052

Intron Length:

67171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTCAG

5'SS Class:

major

3'SS Sequence:

CTCTTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATTAACT

Flanking Amino Acid:

RAVCRLSSGRDLSGEGYRDT

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

61.5

44.7

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

82.9

0.74

0.8

30.6

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

79.9

1.02

1.5

93.44

34.5

Associated Gene:

Gene:

NKD1

Ensembl Gene ID:

ENSAPLG00000013087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040912

7802672 - 7908745

106074

ENSAPLT00000037229

7802911 - 7908745

105835