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Intron Name: Anas_platyrhynchos_platyrhynchos_12_7908214_7908413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7908214 - 7908413

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGATG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

GGCGGCTCAGCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

82.9

0.74

0.7

76.4

32.3

Minor 5ss

34.5

-1.8

3.5

47.3

48.3

Minor BPS

37.8

-1

2.1

36.89

44.9

Associated Gene:

Gene:

NKD1

Ensembl Gene ID:

ENSAPLG00000013087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040912

7802672 - 7908745

106074

ENSAPLT00000037229

7802911 - 7908745

105835

ENSAPLT00000013630

7803672 - 7908446

104775