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Intron Name: Anas_platyrhynchos_platyrhynchos_12_7908447_7908588_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7908447 - 7908588

Intron Length:

142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTAGTTCC

5'SS Class:

major

3'SS Sequence:

TGGATCTGCCTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTCCTCTGGATC

Flanking Amino Acid:

MGKLHSKHAAVCKPRESP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

69.7

35.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

58.6

0.19

50.6

43.7

Minor 5ss

-1.4

2.6

37.2

Minor BPS

52.4

0.06

1.4

63.13

36.7

Associated Gene:

Gene:

NKD1

Ensembl Gene ID:

ENSAPLG00000013087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040912

7802672 - 7908745

106074