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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8139831_8153758_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
8139831 - 8153758

Intron Length:
13928

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGACTT

5'SS Class:
strong_major

3'SS Sequence:
CATCTTGTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTCAT

U12 Branch Point Sequence:
GAGTCCTCATCT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.4
0.76
1
75.5
40.6

Major BPS
82.3
0.8
0.9
81.8
30.8

Major PPT
78.5
0.64
0.9
72.5
37.3

Minor 5ss
36.5
-1.5
3.6
56
48.1

Minor BPS
54.4
0.22
1.9
70.62
45.6

Associated Gene:

Gene:
ADCY7

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8098221 - 8154007
55787