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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8214226_8214470_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8214226 - 8214470

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TAAACTTTATTT

Flanking Amino Acid:

LAEYNMSCDDTGKLILKPRP

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

85.9

0.81

0.8

80.6

31.5

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

56.6

0.29

1.6

70.74

40.4

Associated Gene:

Gene:

CNEP1R1

Ensembl Gene ID:

ENSAPLG00000025705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047864

8210973 - 8215439

4467