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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8226138_8227060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8226138 - 8227060

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGCATC

5'SS Class:

major

3'SS Sequence:

TTTGGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TATGTATTATTT

Flanking Amino Acid:

KEFQPVFKLRMRKEGKEQCS

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

67.1

44.6

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

42.1

-0.9

3.2

51.8

45.2

Minor BPS

48.7

-0

1.9

69.58

41.7

Associated Gene:

Gene:

HEATR3

Ensembl Gene ID:

ENSAPLG00000009802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028584

8226018 - 8241232

15215

ENSAPLT00000010267

8225237 - 8241232

15996