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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8227484_8228327_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8227484 - 8228327

Intron Length:

844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CATTGCTAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATTGCTAAACA

Flanking Amino Acid:

QTMASKNISQCMTPEQLLAL

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

64.3

0.32

58.9

40.7

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

54.2

0.13

2.1

68.06

44.4

Associated Gene:

Gene:

HEATR3

Ensembl Gene ID:

ENSAPLG00000009802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028584

8226018 - 8241232

15215

ENSAPLT00000010267

8225237 - 8241232

15996