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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8231407_8232214_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8231407 - 8232214

Intron Length:

808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCGTCT

5'SS Class:

weak_major

3'SS Sequence:

TGTGATAAACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

AGATACTTAAGA

Flanking Amino Acid:

AFLNNLIPKKRVIALFECLR

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

65.7

40.6

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

57.9

0.18

1.1

49.5

46.9

Minor 5ss

53.6

0.12

2.8

74.3

Minor BPS

0.18

1.8

64.87

40.8

Associated Gene:

Gene:

HEATR3

Ensembl Gene ID:

ENSAPLG00000009802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028584

8226018 - 8241232

15215