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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8232373_8235340_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8232373 - 8235340

Intron Length:

2968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTAGG

5'SS Class:

major

3'SS Sequence:

CTTCTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

ACGTTTGCAAGT

Flanking Amino Acid:

EIIVNMCCSEDPSDDEWEEL

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.2

66.5

44.5

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

86.3

0.82

0.8

83.9

31.1

Minor 5ss

37.6

-1.4

2.4

43.2

43.7

Minor BPS

39.6

-0.7

2.2

52.92

43.1

Associated Gene:

Gene:

HEATR3

Ensembl Gene ID:

ENSAPLG00000009802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028584

8226018 - 8241232

15215

ENSAPLT00000010267

8225237 - 8241232

15996