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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8236409_8237207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8236409 - 8237207

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TACGTTTCAACT

Flanking Amino Acid:

KHVLLRTLIAGTIWNIKDTI

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.2

37.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

70.8

0.47

69.9

40.9

Minor 5ss

45.8

-0.4

2.9

65.2

Minor BPS

0.17

1.6

68.33

Associated Gene:

Gene:

HEATR3

Ensembl Gene ID:

ENSAPLG00000009802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028584

8226018 - 8241232

15215

ENSAPLT00000010267

8225237 - 8241232

15996