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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8238176_8239947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8238176 - 8239947

Intron Length:

1772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGCATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTGACCT

Flanking Amino Acid:

NEAINLLWNVCECNSTAVSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

37.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.7

0.49

71.6

39.1

Minor 5ss

40.7

-1

2.7

47.6

42.2

Minor BPS

56.2

0.27

1.9

81.75

39.7

Associated Gene:

Gene:

HEATR3

Ensembl Gene ID:

ENSAPLG00000009802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028584

8226018 - 8241232

15215

ENSAPLT00000010267

8225237 - 8241232

15996