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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8251336_8253825_F

Intron Information:

Intron Rank:

146821

Intron Class:

major

Intron Phase:

Intron Coordinates:

8251336 - 8253825

Intron Length:

2490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGCTCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TCTGATTGGAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

64.1

36.7

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

-0.4

2.8

58.6

41.1

Minor BPS

44.1

-0.3

1.8

61.4

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019947

8251233 - 8254342

3110