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Intron Name: Anas_platyrhynchos_platyrhynchos_12_85203_85710_F


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
85203 - 85710

Intron Length:
508

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGTGCA

5'SS Class:
strong_major

3'SS Sequence:
TTTTCAAATTAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATA

Flanking Amino Acid:
NCTPADCAEPNSNIIKLLET

Intron Amino Acid Position:
886

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82
0.75
0.9
71.5
33.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
66.7
0.38
1.1
70.5
38.4

Minor 5ss
28
-2.5
3
33.3
41.7

Minor BPS
82.2
1.01
0.9
86.33
25.3

Associated Gene:

Gene:
ANKRD27

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

53478 - 88364
34887

49996 - 88364
38369

49668 - 88364
38697