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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8554052_8555170_F

Intron Information:

Intron Rank:

125586

Intron Class:

major

Intron Phase:

Intron Coordinates:

8554052 - 8555170

Intron Length:

1119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAATTC

5'SS Class:

major

3'SS Sequence:

GTCCTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCACAT

U12 Branch Point Sequence:

AGTGCATGAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

0.9

74.4

29.8

Major BPS

53.7

0.09

1.1

60.7

37.6

Major PPT

80.4

0.68

0.8

76.9

31.8

Minor 5ss

36.4

-1.5

3.3

49.9

46.6

Minor BPS

44.8

-0.4

57.18

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027700

8553556 - 8556183

2628