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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8566506_8568781_F

Intron Information:

Intron Rank:

124094

Intron Class:

major

Intron Phase:

Intron Coordinates:

8566506 - 8568781

Intron Length:

2276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

TTTTCTTCAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTTAT

U12 Branch Point Sequence:

TTTTCTTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

74.7

41.5

Major BPS

71.3

0.53

61.3

Major PPT

84.5

0.78

0.8

81.6

28.9

Minor 5ss

42.1

-0.9

3.1

60.2

44.1

Minor BPS

78.6

0.89

1.4

87.68

29.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036613

8566257 - 8613827

47571