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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8711768_8720909_F

Intron Information:

Intron Rank:

145931

Intron Class:

major

Intron Phase:

Intron Coordinates:

8711768 - 8720909

Intron Length:

9142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GAATGCTTAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

80.8

34.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

66.2

0.37

63.3

37.1

Minor 5ss

46.2

-0.4

2.8

62.9

41.8

Minor BPS

54.1

0.21

2.1

70.94

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044354

8711107 - 8721451

10345